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Ph.D. Presentations

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Today
  • August 2026

  • Fri 28
    Close-up abstract image of a circuit board with glowing lines and interconnected pathways.

    Nag, S. (BMEB) – Personalized Diploid Genome Graphs for Accurate Somatic Variant Discovery

    August 28 @ 10:00 am – 12:00 pm
    Engineering 2 Engineering 2 1156 High Street, Santa Cruz, CA
    Hybrid Event

    Many somatic variant-calling pipelines begin by aligning tumor and matched-normal sequencing reads to a single linear reference genome, such as GRCh38. Because every individual differs substantially from this reference, this approach can introduce reference bias, causing reads to map incorrectly or not at all and potentially leading to missed somatic variants or germline variants being […]

  • September 2026

  • Tue 1
    Close-up abstract image of a circuit board with glowing lines and interconnected pathways.

    Shen, J. (STAT) – Bayesian Modeling and Uncertainty Quantification for Verbal Autopsy Data

    September 1 @ 9:00 am – 11:00 am
    Virtual Event

    Verbal autopsy (VA) is a well developed tool to collect information describing deaths outside of hospitals by conducting surveys to the relatives and caregivers of the deceased person. It is routinely-implemented in low and middle income countries, where it often lacks sufficient resources to conduct the autopsy. The main task is to estimate both individual […]

  • Tue 8
    Three silhouetted figures talking, overlaid with graphics of digital data, charts, and technology interfaces.

    Zhang, X. (STAT) – Predictive Generalized Variational Inference for Spatial Gaussian Process Model

    September 8 @ 8:30 am – 10:30 am
    Virtual Event

    Spatially dependent data are common in environmental and climate studies, where Gaussian process models are used for prediction and uncertainty quantification. Learning their covariance structure involves both statistical and computational challenges. Likelihood-based inference may be sensitive to covariance misspecification, while repeated evaluation of prediction-oriented criteria can be computationally demanding. To study these issues, we develop […]

  • Wed 9
    Abstract digital illustration featuring gears and interconnected technology elements.

    Devarajan, K. (ECE) – Towards Multimodal Detection of Neuronal Signaling using Graphene Heterostructures

    September 9 @ 10:00 am – 11:30 am

    Understanding neuronal function requires measurements that capture both the rapid dynamics and spatial organization of neural activity. Conventional neural interfaces often prioritize either high temporal resolution through electrophysiological recording or […]

  • Wed 9
    Abstract digital illustration featuring gears and interconnected technology elements.

    Chen, Y. (STAT) – Flexible Bayesian Models for High-Dimensional and Longitudinal Discrete Data in Microbiome Studies

    September 9 @ 10:00 am – 12:00 pm
    Virtual Event

    Multivariate dependent discrete data routinely arise in microbiome studies. Analyzing these data presents interesting statistical challenges, such as high dimensionality, excess zeros, large heterogeneity across samples, and temporal dependence in […]

  • Wed 9
    Close-up abstract image of a circuit board with glowing lines and interconnected pathways.

    Abdulaziz, A. (ECE) – Learning-Based Channel Estimation for Next-Generation Wireless Communications

    September 9 @ 10:00 am – 12:00 pm
    Engineering 2 Engineering 2 1156 High Street, Santa Cruz, CA
    Hybrid Event

    Coherent wireless reception depends on accurate channel state information (CSI), yet acquiring CSI through pilot transmission consumes time–frequency resources that could otherwise carry data. This tradeoff becomes more pronounced in […]

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Last modified: Jul 21, 2026